filepath = E:\B06-11073.RAW %data file path
filetype = RAW %data format (RAW,DTA)
T_d_score = 10 %D-score cut-off, decrease this value to increase sensitivity at the cost of speed and specificity
T_delta_c = 0.3 %cutoff for mass interval filtration, decrease this value to increase sensitivity at the cost of speed and specificity
masstol = 5 % mass tolerance in ppm used to remove spectra redundancy
modmasslow = 1 %minimum modification mass (positive integer)
modmasshigh = 200 %maximum modification mass (positive integer)
timelow = 0 %lower bound of retention time
timehigh = 1000000 %uppper bound of retention time
masslow = 0 %lower bound of m/z
masshigh = 1000000 %upper bound of m/z
findpair = 0 %1:output spectral pairs, 0: no
ppthres = 0.98 %spectral pair probability
dtaname = B06-11073 %prefix of DTA files, e.g. B06-11073 for B06-11073.1234.1234.2.dta